Being new to R I found it hard to get what I want out of dataframes. I stumbled across a package called SQLDF which lets you use SQL statements (SQLite syntax I think) to query the dataframes by replacing table names are replaced with data frame names.
While this might not be a good option in the long term it has certainly helped me get my head around things.
Here is a video of me getting started:
http://www.youtube.com/watch?v=gNJGu0b9cgw
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